PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02619.1.g00070.1.sm.mkhc
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 307aa    MW: 32643.2 Da    PI: 10.743
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02619.1.g00070.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.96.6e-31224281359
                                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                     D y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+++dp ++++tYegeH+h+
  Zpz_sc02619.1.g00070.1.sm.mkhc 224 DDYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERATDDPGMLVVTYEGEHRHT 281
                                     99***********************9888****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105334.2E-18178220IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.805.6E-32210281IPR003657WRKY domain
PROSITE profilePS5081130.435217283IPR003657WRKY domain
SuperFamilySSF1182902.75E-26220281IPR003657WRKY domain
SMARTSM007745.5E-36222282IPR003657WRKY domain
PfamPF031064.0E-26224280IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MAVDLMGCYA PRRSNDQLAI QEAATAGLRS LELLVSSLSS RAAAPHKAAQ QQQQQPLGEI  60
ADQAVSKFRK VISILDRTGH ARFRRGPVEP RPAPAAVPTL APTPVQQHVA PFVAQPAPTT  120
QPQSLTLDFT KPNLMTMSGA TSVTSTSFFS SVTAGEGSVS KSRSLLSAGK PPLSGHKRKP  180
CAGAHSEATT NGSHCHCSKR RKNRVKRTIR VPAISSKIAD IPPDDYSWRK YGQKPIKGSP  240
YPRGYYKCST VRGCPARKHV ERATDDPGML VVTYEGEHRH TPGATAPSPL APAPIAAAVV  300
SAGNGHV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A9e-22210280271WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKU0586150.0KU058615.1 UNVERIFIED: Panicum miliaceum WRKY26-like gene, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002447056.11e-153hypothetical protein SORBIDRAFT_06g027710
SwissprotQ9SV158e-94WRK11_ARATH; Probable WRKY transcription factor 11
TrEMBLC5YFI11e-153C5YFI1_SORBI; Putative uncharacterized protein Sb06g027710
STRINGSb06g027710.11e-153(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61738171
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.14e-74WRKY DNA-binding protein 11